Gene_name | Experimentally Verified Resistance Gene Information | Predicted Resistance Gene Information |
actP/yjcG | BacMet ID: BAC0564Code for:
Membrane transporter/EnzymeFamily: Sodium:solute symporter (SSF) familySequence: FASTACross-database IDs: LinkOrganism: Escherichia coli (strain K12)Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate]Description: Transports acetate. Also able to transport glycolate.Length (amino acid):
549Reference: Gimenez et al. 2003; Pubmed- 14563880
| Similar
resistance genes in 'BacMet Predicted database' |
cmeD | BacMet ID: BAC0615Code for:
EffluxFamily: RND superfamily, OMF familySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: CmeD is the outer membrane protein.Length (amino acid):
424Reference: Akiba et al. 2006, Pubmed- 16303882
| Similar
resistance genes in 'BacMet Predicted database' |
cmeE | BacMet ID: BAC0616Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: CmeE is a periplasmic fusion proteinLength (amino acid):
246Reference: Akiba et al. 2006, Pubmed- 16303882
| Similar
resistance genes in 'BacMet Predicted database' |
cmeF | BacMet ID: BAC0069Code for:
EffluxFamily: RND superfamily; AcrB/AcrD/AcrF familySequence: FASTACross-database IDs: LinkOrganism: Campylobacter jejuniLocation:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: Integral membrane component of efflux system (Multidrug efflux system CmeDEF)Length (amino acid):
1005Reference: Akiba et al. 2006, Pubmed- 16303882
| Similar
resistance genes in 'BacMet Predicted database' |
vmeC | BacMet ID: BAC0510Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Rhodamine 6G [class: Xanthene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide]Description: VmeCD uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
368Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeD | BacMet ID: BAC0511Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Rhodamine 6G [class: Xanthene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide]Description: VmeCD uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
1040Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeE | BacMet ID: BAC0512Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Acriflavine [class: Acridine]Description: VmeEF uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
364Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeF | BacMet ID: BAC0513Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Acriflavine [class: Acridine]Description: VmeEF uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
1037Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeG | BacMet ID: BAC0517Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.Length (amino acid):
343Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeH | BacMet ID: BAC0518Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.Length (amino acid):
361Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeI | BacMet ID: BAC0519Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.Length (amino acid):
1033Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeP | BacMet ID: BAC0522Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Part of the VexPQ efflux transpporter. VexPQ VexGHI uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes.Length (amino acid):
380Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeQ | BacMet ID: BAC0523Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Part of the VexPQ efflux transpporter. VexPQ VexGHI uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes.Length (amino acid):
1046Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeT | BacMet ID: BAC0524Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.Length (amino acid):
361Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeU | BacMet ID: BAC0525Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.Length (amino acid):
353Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeV | BacMet ID: BAC0526Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.Length (amino acid):
1019Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeY | BacMet ID: BAC0514Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Part of the VexYZ efflux transporter. VmeYZ uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
375Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vmeZ | BacMet ID: BAC0515Code for:
EffluxFamily: RND superfamilySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Part of the VexYZ efflux transporter. VmeYZ uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.Length (amino acid):
1050Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |
vpoC | BacMet ID: BAC0516Code for:
EffluxFamily: RND superfamily, OMP familySequence: FASTACross-database IDs: LinkOrganism: Vibrio parahaemolyticus RIMD2210633Location:
ChromosomeCompound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Homologue of E. coli TolC outer membrane protein, vpoC.Length (amino acid):
442Reference: Matsuo et al. 2013; Pubmed- 23894076
| Similar
resistance genes in 'BacMet Predicted database' |